PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID cra_locus_57470_iso_1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Apocynaceae; Rauvolfioideae; Vinceae; Catharanthinae; Catharanthus
Family ERF
Protein Properties Length: 135aa    MW: 15102.6 Da    PI: 5.1871
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
cra_locus_57470_iso_1genomeMPGR-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.23.6e-071233355
                                  AP2 33 lgkfgtaeeAakaaiaarkkleg 55
                                         lg+f taeeAa+a+++a+  l+g
  cra_locus_57470_iso_1_len_404_ver_3  1 LGTFETAEEAARAYDEAACLLRG 23
                                         79****************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.77E-15130No hitNo description
PROSITE profilePS5103210.705131IPR001471AP2/ERF domain
SuperFamilySSF541712.22E-8132IPR016177DNA-binding domain
SMARTSM003805.9E-4139IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-12131IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    Send to blast
LGTFETAEEA ARAYDEAACL LRGSNTRTNF VTDYVSPDSP LASRIRNLLN NRKQKTNPKT  60
KTPNNTPTSS SSSSSSSLHS VSPSCQKIQE NNLLDFDDAY KPDMISNLCD EFDIDMRGRW  120
GLEQAFDHRF PFSTT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010097403.12e-30Ethylene-responsive transcription factor
TrEMBLA0A068V3473e-35A0A068V347_COFCA; Uncharacterized protein
STRINGVIT_08s0007g07250.t011e-29(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA20182261